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Continuous time Boolean modeling for biological signaling: application of Gillespie algorithm
Continuous time Boolean modeling biological signaling application of Gillespie algorithm Molecular Networks
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2012/4/28
This article presents an algorithm that allows modeling of biological networks in a qualitative framework with continuous time. Mathematical modeling is used as a systems biology tool to answer biolog...
McGenus: A Monte Carlo algorithm to predict RNA secondary structures with pseudoknots
McGenus Monte Carlo algorithm RNA secondary structures pseudoknots
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2012/4/28
We present McGenus, an algorithm to predict RNA secondary structures with pseudoknots. The method is based on a classification of RNA structures according to their topological genus. McGenus can treat...